草鱼长链非编码RNA1153应对GCRV感染的调控功能

FUNCTIONAL ANALYSIS OF LONG NON-CODING RNA1153 IN RESPONSE TO GCRV INFECTION IN GRASS CARP (CTENOPHARYNGODON IDELLA)

  • 摘要: 为了解长链非编码RNA在GCRV感染草鱼过程中的分子调控机制, 对GCRV攻毒的草鱼肾脏细胞(CIK)进行长链非编码RNA组学测序, 在此基础上, 筛选出在GCRV攻毒前后差异表达明显的lncRNA1153(PP712057)。利用qRT-PCR技术对lncRNA1153在草鱼CIK细胞中的时空表达水平进行了检测, 发现在GCRV感染细胞后, lncRNA1153的表达水平在稳步上升至32h达到峰值。在CIK细胞内对该lncRNA进行过表达实验, 发现在lncRNA1153过表达的细胞系中, 在GCRV攻毒后, 干扰素的mRNA表达水平上调。同时, 通过在CIK细胞内进行过表达及RNA pull-down实验, 将富集的蛋白质进行质谱分析, 从中筛选出P62蛋白进行了深入研究。qRT-PCR验证发现, 在草鱼肝脏、肾脏等组织及CIK细胞中, lncRNA1153与P62的表达趋势大致相同。进一步的研究发现, GCRV感染CIK细胞后, 过表达lncRNA1153与P62都对GCRV病毒蛋白的复制起到抑制作用。研究表明长链非编码RNA在草鱼拮抗GCRV感染的先天性免疫机制中发挥重要作用, 为未来设计针对GCRV感染的lncRNA靶向治疗提供参考。研究探讨了扮演的角色, 为进一步深入研究其分子机制奠定了一定的基础。

     

    Abstract: Long noncoding RNAs (lncRNAs) are involved in many biological processes including the immune response against virus infection. Based on our previous study, the lncRNA1153 (PP712057) was selected for functional analysis following of GCRV infection in grass carp, both in vivo and in vitro. QuantitativeReal-time PCR analysis revealed that lncRNA1153 was expressed in all examined organs, with particularly high level in muscle tissue. Temporal expression analysis in vitro showed a gradual increase in lncRNA1153 expression levels in CIK cells in response to GCRV infection whereas reached a peak at 32h post infection. In addition, in vivo analysis indicated that the expression levels of lncRNA1153 was significantly up-regulated in the kidney starting from 5d post infection, reaching its peak at 8d post infection. Furthermore, overexpression of lncRNA1153 activated several interferon (IFN) promoters and significantly decreased GCRV proliferation, while knockdown of P65 produced opposite effects. We also conducted RNA-protein pull-down assays to analyze lncRNA-protect interactions, identifying P62 as a candidate. Similar to lncRNA1153, P62 was expressed in all examined tissues, particularly at high levels in muscle. Our study suggests that P62 may play a critical role in the innate immune response to GCRV infections. In summary, our research preliminarily explores the innate immune mechanisms of lncRNA1153 in grass carp against GCRV infection.

     

/

返回文章
返回